One row per alignment block. Alignments were computed with minimap2.
Format
A data frame with 125 rows and 23 columns
- file_id
name of the file the data was read from
- seq_id
identifier of the sequence the feature appears on
- length
length of the sequence
- start
start of the feature on the sequence
- end
end of the feature on the sequence
- strand
orientation of the feature relative to the sequence (+ or -)
- seq_id2
identifier of the sequence the feature appears on
- length2
length of the sequence
- start2
start of the feature on the sequence
- end2
end of the feature on the sequence
- map_match, map_length, map_quality, NM, ms, AS, nn, tp, cm, s1, de, rl, cg
see https://github.com/lh3/miniasm/blob/master/PAF.md for additional columns