A data.frame or a character vector with paths to files containing sequence data. Data columns:
A data.frame, a list of data.frames, or a character vector with paths to files containing gene data. Each item is added as feature track.
For a single data.frame the track_id will be "genes" and "feats", respectively. For a list, track_ids are parsed from the list names, or if names are missing from the name of the variable containing each data.frame. Data columns:
A data.frame or a character vector with paths to files containing link data. Each item is added as links track. Data columns:
used to infer pseudo seqs if only feats or links are provided, or if no bin_id column was provided. The expressions are evaluated in the context of the first feat or link track.
By default subregions of sequences from the first to the last feat/link
are generated. Set
infer_start to 0 to show all sequences from their
Indicates whether links should be created between adjacent sequences/chromosomes only.
By default it is set to
adjacent_only = TRUE. If
FALSE, links will be created between all sequences
(not recommended for large data sets)